had the same thing happen to me. get under the car and look at where the linkage lever mates w/ the rod coming out of the transmission. In my case the spring loaded sleeve had slid back to allow th dowel holding the linkage to the rod too wiggle up and almost out (cross your fingers it didn't fall out completely.
Temporary fix would be to tap the dowel back into place and duck tape the sleeve into place. Long term fix.... install the linkage kit here http://store.nexternal.com/shared/StoreFront/default.asp?CS=ireland&StoreType=BtoC&Count1=263012111&Count2=180152535 .look under 2002 short shift kit, and have better than new.
Then again this happened a different time...... but you can find if that is the culprit pretty easily.
EDIT: didn't read the smoking clutch part, but that's pretty obvious as esty pointed out. you DO NOT have the remove transmission to see the linkage. But you could have solved that by looking under the car before coming on here. Best of luck, if you need some help and your around fullerton-ish give me a call 714 818 2706